For the purpose of sub-topic A, the terms 'animal' and 'farm' apply to both terrestrial and aquatic animals. Research activities should generate experimental data to map out what part of farmed animal genomes are active (whether coding or regulatory), and under which circumstances, characterise the resulting phenotypes and assess how phenotypes are affected by genetic and epigenetic changes. Bioinformatic analyses should support identification of these functional and structural elements in genomes, and enable the development of tools for genotype to phenotype prediction. Work should also help to develop or extend terminologies (ontologies) to describe, represent and standardize annotation. Proposed projects should target one or more farmed animal species with high-quality genome assemblies (in particular cows, chicken, pigs, sheep, salmon and other relevant species), focussing on specific tissue panels, and address correlations between normal and abnormal situations.
Dateline for submission: 13 February 2018 17:00:00 (Brussels time)
Illustration Photo: Breeding Charolais cattle in France (credits: Daniel Jolivet / Flickr Creative Commons Attribution 2.0 Generic (CC BY 2.0))